After finishing his military training with Colonel Crouger, Van returns home to the Wind Colony. He is soon reunited with Fionia and Dr. D. Van must defend the Wind Colony from a Zoid using a red organoid. After he defeats it, him and Fiona are assigned to the Guardian Force.

Van and Fiona run into a man who says he is going to retrieve lost war weapons. Later, they meet a detective who says that the man is a crook and is realy after gold. The detective is realy a crook, too, and is working with the other man. Van realizes this and defeats him and his Gun-Sniper.

Van is haunted by visions of Fiona's demise because of a Blue Devil whose name is Reece. She can tamper with peoples minds. She tries to make Van think that Fiona is a burden. Van defeats her and her organoid, Spectula.

Van and Fiona are assigned to protect a village along with Shoobaultz's little brother, Thomas. Zeek gets red paint spilled on him and is mistaken for the red organoid Ambiant. Thomas uses a D-Bison with an AI program installed in it called Bic. Together, they are able to save the village.

Van and Fiona are once again assigned to work with Thomas. This time, their opponents are invisable Zoids. They are lead by a man named Hiltz who owns the red organoid Ambiant. With Bic's help, they are able to defeat their invisable foes.

Van runs into his old friend, Irvine. However, Irvine has joined a group of Zoid Hunters. Van defeats the Zoid Hunters with Irvine's help. Irvine leaves the Zoid hunters and bids farewell to Van.

It was raining and the First Division of Panzer unit in the Imperial Army made to a supply base that held more than 250 Megatons worth of explosives. It was an urgent call made two days ago, and the commander of the first Panzer Division was no other than Karl Shoobaultz. After checking part of the base, he was trapped with all his men. He found out that they were all being controlled by Reice. After long and hard fighting by Colonel Shoobaultz, he gives in. Thomas calculates that the cooling valves have been closed so that there would be an explosion that would wipe out the respectful parts of both nations. In the morning, Thomas finds out that his brother is in their, and both him and Van go in to shut down Reice. Van goes in through with out his Blade Liger on Zeek. Then Reice captures Fiona and uses her organoid, Specula to control the Iron Kong. Van and Thomas make great time until Thomas runs into his brother. Thomas starts a fight with the Kong. The Kong completely annihalites a

Episode starts out with a Godos being stolen and ised to destroy its own base with a black organoid. In the morning, Van goes to check out the base, or whats left of the base. Van looks around the base and sees that it was a thorough job. Whoever did this didn't want a trace of anything to be left behind. Then a survivor tells Van that this was done by a black organoid. In the back of his mind Van thinks this couldn't be possible. He calls in Thomas Shoobaultz. Van and Thomas had a talk with each other and Van filled in Thomas with all the details about the black organoid and Raven. Van thinks that that it might be a mistake bringing Thomas into this mission. Meanwhile, in the desert at the time Raven was walking alone and a Gustav pulled up and gave Raven a ride and some water. Then Thomas says that taking Raven down would be a piece of cake, and that he would win. Raven isn't the Raven that Van knew back in Chaotic Century, he has been psychologically effected by the loss he received

Van, Fiona, Thomas, and Zeek enjoy a vacation along with Emperor Rudolf and his fiance, Lady Mary-Anne. Lady Mary-Anne encourges Thomas to tell Fiona that he loves her. However, every time he tries to, Zeek gets in the way. Old enemies show up and kidnap Rudolf. Van has to defeat them without harming Rudolf. In the end, Raven shows up and attacks Thomas and his D-Bison.

Moonbay returns to help Thomas. Raven attacks in his Geno-Saurer. Moonbay's Gusthav acts like a shield and blocks a charged partical beam from Raven. Shadow ( Raven's organoid ) decides that they should retreat. The Geno-Saurer begins to transform.

Two Stealth Storm Sorders (Triple SSS) were being brought to an Dragon Head Base near the Red River as a symbol for peace. Behind them was Muler and Major Ralph from the Imperial Air Base Ebinar. Irvine and Van are taking Moonabys Gustav to the Dragon Head Base, and are wondering why Raven didn't finish him off when he had the chance. They find out it wasn't the Genosaur or Raven's will to leave the battlefield, instead it was Shadow's decision to leave. Then the Triple SSS are stolen by Major Ralph and Muler with the help of Ambient, the Red Organoid that belongs to Hiltz. When Van and the rest of the gang make it to Dragon Head Base, they find out about the stolen Triple SSS's, and since it fell under Guardian Force headlines, it was their mission to stop them and bring them back. Van believes since the Triple SSS's aren't yet equipped with Command Options, they will be back for the Command Options. Then Van strategies a complete and nice way to trap the Triple SSS when they come. Re

Van and Fiona go to an Island where Dr. D is waiting for them. Soon, an ancient zoidian city will be discovered. Reece shows up and tries to convince Fiona that she gives misfortune to Van. Van defeats Reece in an underwater Zoid battle. Van saves Reece's life, and Spectula shows up and takes her away.

After coming back from Lumear Island and defeating the Hammerhead, Van had made it back to a base near the Genosaur's Cacoon. An Imperial soldier finds Raven by the Genosaur's Cacoon. Then the rest of the Imperial soldiers come and arrest Raven. Raven was being interrogated by Majro Shoobaultz. Then everyone checks out the Genosaur's cacoon. The Genosaur is evolving but int what? The republican and Imperial forces joined together in order to destroy the cacoon. After an all out assault against the cacoon, but it fails because the glowing cacoon actually protects and diverts all firepower away from it, the same would have happened if some had launched an assault on the Shield Liger's cacoon. They were going to wait unti lthe cacoon hathes and the Genosaur is reborn for their second assault. There was a whole fleet of zoids many mixes in the Imperial Zoids, several Red Horns and Iron Kong surrounded by Molga and Hel Digunner units.The Republicans had many Gojulas's and Gordos's surrounde

Irvine's Command-Wolf is badly damaged and won't survive. Irvine is going to give up being a zoid pilot. Dr. D wants to transfer the Command-Wolf's battle data to a new zoid called the Lightning-Siax. At first, Irvine gets mad, but then realizes that his Command-Wolf would want it that way, so he lets him. Irvine is now the pilot of the Lightning-Siax.

Raven remembers when he was a child. He remembers his family being killed by an organoid, and then, being found by Van's Father. During a battle, Raven had pointed a gun at Prozen with the safety cap still on. Prozen taught him how to use a gun and gave him a black organoid called shadow.

After training real heard for te arrival of the Geno-Breaker, Van had upgraded the booster on the Blade Liger. The upgraded booster made the Blade Liger faster than the Lightning Siax w/o a booster. Reice has a talk about the Geno-Breaker and why it is Red instead of being Dark Blue or Black. It seems that Hiltz must've done something to the previous Genosaur that made it come out Red. Also, Hiltz is not interested in either Van or Raven, he just wants who wins. Then Colonel Halford talks to the three pilots about the Geno-Breaker, and how it just finished attacking the Lightning Siax development plant of the Empire and its next target is this base. He also has a talk with Fiona, tells her to ask Thomas and Irvine to remove the electrical pulse generators and degrade the booster of the Blade Liger. He also tells Fiona after that she would be working with the ancient ruins study team again with him instead of this Guardian Force Team. Of course knowning Fiona, she told the other guys bu

After being defeated by Raven, Van takes shelter in a nearby village. He meets a boy named Michello who loves zoids as much as he does. An old enemy of Van's attacks the village. Van defeats him and learns that Michello actualy died during the war.

Van is becoming such a good zoid pilot that his skills are surpassing the Blade-Liger. Dr. D creates some boosters in an attempt to make the Blade-Liger Faster. Zeek is acting strangely. It turns out that a new power has been unlocked in Zeek.

Moonbay competes in the Guylos Grand Prix race. An assasin named Phantom is plotting to kill Rudolf at the race. Van and Thomas try to stop him. He shoots Rudolf, but it's just a hologram. Rudolf was actually in the race and won it.

The Guardian Force dicusses their enemies and allies. They talk about Hiltz, who Van first met at the wind colony, Reece, A.K.A. the Blue Devil who can tamper with people's minds, and Raven, who's Geno-Saurer recently transformed into a Geno-Breaker. They also talk about their brave members like Van Flyheight, pilot of the Blade-Liger, Irvine, pilot of the Lightning-Siax, and Thomas Richard Shoobaultz, pilot of the D-Bison. Soon, they are pitted against Hiltz in battle once again.

After somehow defeating the Whale King, Van and Thomas find themselves in a mystery. Some people are stealing zoid parts which are still being developed. The weapons have their clear advantage, after finding it out against a couple of Hel Digunners. Meanwhile, a Gustav carrying stolen zoid parts from both respective nations stops after it drops some of its cargo. Irvine piloting the Lightning Saix sees they could use a hand and jumps out offering assistance. Irvine finds out what they are carrying and demands an explanation but before that happens, he gets knocked out. He turns on his one eye video piece. He captures the general's face and is later used for military intelligence. When Irvine wakes up he finds out he is being accused of stealing the zoid parts and also his Lightning Saix has been stolen. After the officier in charge denies everyone of his statements, they board a militaristic brown Hammerhead. After a couple of minutes on the Hammerhead, the officer in charge goes to th

Thomas tells Van and Fiona about the mysterious trinity ghost and the strange trials it puts people through. Soon, Thomas gets a verdict and is on trial by the trinity ghost as well. He is beaten by their mysterious three-headed zoid. Van defeats it and reveals that the three-headed zoid was actually just a hologram. Some zoid scientists were behind the whole thing.

Van, Irvine and Thomas are making some adjustments to the Attack Booster. It seems they attack booster can be upgraded to make the Blade Liger go several times faster. Which would increases the chances of defeating the Geno-Breaker. In some cliffs, Hiltz and Ambient are about to release an ancient type of zoid. At the base, Fiona senses the heat signature of this crude zoid and rushes off. Then Hiltz reports to the Dark Kaizer as Hiltz is talking to the Dark Kaizer, Raven drops in on Hiltz and after a few seconds leaves to the top of the mountain and looks at the stars. He vows next time Van and him meet that one of us will die. Fiona has a very bad dream and finds what she went looking for. At the base, Van went to try out the enhnaced booster while, Moonbay, Thomas and Fiona flew off in the Pteras's and Dibison. Later on, Van and Irvine prep their zoids for battle as they hear Raven is approaching in the Geno-Breaker. Fiona finds Hiltz zoid, which has a zoid core temperature of 6,000

After being unsuccesful in stopping Hiltz, he took to orbit in the Hammer Kaizer with the Death Stinger in it. Fiona piloting a Pteras and Moonbay piloting a Silver Pteras, they were monitoring the Hammer Kaizer. Hiltz announces to everyone in the Republic about the Death Stinger and asks them what the name of the town below their is, Major Herman tells him if he doesn't know then he won't tell him. Hiltz destroys it with a blast of the Charged Particle Gun from the Death Stinger. Major Herman goes to the Capital and asks the Madam President, about taking two Storm Sworders into space. He wants the pilots on Storm Sworders to be Van Flyheight and Thomas Shoobaultz. At the battlefield where both Van and Thomas are alongside Irvine, are attacked by a couple of Hel Digunners. Van tells Irvine to take his place as the Storm Sworder pilot, and they should leave now. Meanwhile, surrounded by several cliffs, the severly-damaged Geno-Breaker rests along with Shadow in its left claw. As Raven m

Hiltz attacks New Helic City with his Death-Stinger. Herman and his troops try to fight him off. Raven wants revenge and attacks Hiltz as well. Reece shows up and figures out that Hiltz no longer needs her. Hiltz is to strong and Herman has to retreat.

After retreating from the doomed Capital, the Republican and Imperial Forces have been going to Windean Lake. This is where the Republican's Secret Weapon, the Ultrasaurus was resting. A last ditch strategy they will use to defeat the Death Stinger is under way. They are planning to awaken the Ultrasaurus, a heavy carrier zoid, which would provide them with cover and fire power to take on the Death Stinger. Colonel Herman believes there is only a 50% chance the Ultrasaurus will awaken. Van talks some sense in to Colonel Herman and eventually makes him realize, he has to believe in that 50% chance the Ultrasaurus will awaken or its hopeless. Six power blocks of the Ultrasaurus are ready for action and are functioning well to their maximum. Moonbay got an idea to kick start the seventh power block of the Ultrasaurus. Meanwhile, the Death Stinger slumbering in the molteon lava with in a mountain, it blows through the mountain with a Charged Particle Beam and sets out after the Ultrasaurus

After the Ultrasaurs had awoken and made it to sea as it starts out for the journey to the Empire, Van and Irvine start engaging the Helicats and start taking them one by one until the Death Stinger charged its Charged Particle Beam. Van and Irvine, knowing the power of the beam, turned around started to run. As the Charged Particle Beam made its way toward them, both the Blade Liger and Lighting Saix kicked into their boosters and started to run as fast as their zoid's capacity. the beam was going to hit them, but Rosso and Viola picked them up and delievered them to the Ultrasaurus just in the nake of time. Colonel Herman goes over the meeting abou thte Ultrasaurs and its defenses. Besides basic armaments and normal defensive tactics its completely vunerable, so they are going to a top secret Imperial Plant to get the Gravity Cannon, once this is in place the Ultrasaurus will be a truely powerful and invincible force to be reckoned with. They had sent out a Hammer Head for surveilanc

The Ultrasaurus arrives in an area where there are a lot of islands and finds the one where the gravity cannon is ready to be installed onto it. Krueger is taken to Guygalos to recover and rest, and Rudolf arrives. Then everyone looks at the gravity cannon, and are surprised at how huge it is, but they have to equip it on the Ultrasaurus quickly or the enemy will find them. Meanwhile, Hiltz has arrived in the islands and sends lots of Sinkers to find the Ultrasaurus. At a meeting, Dr. D explains how the gravity cannon works. There are two parts to it, the actual gun and the power generators. The shell is made of a very dense material that has its own gravitational field, and will make a ""black hole"" when it hits its target. The only problem is that there are only three shells, and one must be used for a test shot. Karl is appointed to aim and fire the gravity cannon. Van, Thomas, and Irvine check on their Zoids. The gravity cannon is linked to the Ultrasaurus. Fiona is worried about th

The gravity cannon is ready to go up against the Death Stinger, the only problem is that they must get the Death Stinger to hold still long enough for it to feel the full impact of the gravity cannon. The decision to use the delta formation is used. Once the Death Stinger is in sight Van, Urvine, and Thomas leave in their zoids leaving Van as the back point of the triangle. They manage to get the delta formation completed, only this time when the get into the formation it creates a pyramid shield barrier trapping the Death Stinger inside. The cannon shoots, but just before it gets close enough to the Death Stinger it breaks the shield barrier and fires its Charged Partical beam, destroying the shell. The fighters come to the conclusion that if they take off their shields they can concentrate more energy on the barrier, the fith commences. Finally they reform the delta formation this time concentrating every bit of energy on the barrier. The shell is shot and Hilts tries to break free o

Just when you thought the nightmare of the Death Stinger is over, it gets renewed. The episode starts off with the Death Stinger being destroyed by the gravity cannon, but just when everything seemed to be over, Ambient appears and fuses with the destroyed Death Stinger, reviving it. Van and Irvine tried to make a attack, but the DS burried itself into the ground, and went attacking the Ultrasaurus, which injured Dr. D. Also, Raven runs up to Shadow, who thought Shadow would be pleased to see him again, but unfortanetly, things were terribly wrong. Shadow attacked Raven violently, and the Dark Kaiser comes up, and tells Raven that Shadow is now a slave to him. This definitely aggrivated Raven, and he started charging after the Dark Kaiser, but he was flipped. At the end of this episode, Fiona is thunderstruck when she heard ""Zoid Eve"", and was hit by a stray bullet from the Death Stinger. As usual, Van got out of his zoid, and ran up to Fiona. Her last words before she dissapeared into

Finally, in this episode, all the mysteries that have been unanswered are finally revealed, along with the true identity of the Dark Kaiser. This episode explains what Zoid Eve really is, and at the end of this episode, Van gets ready to start fighting Hiltz in his Death Stinger again(You thought he was dead didnt you).

The final battle between Van and Hiltz has arrived, but Fionna keeps seeing Prozen. Reece, flying on Specula, appears in front of Prozen (Raven, Reece, and their organoids were awakened when Fioana opened the gate to Zoids Eve). It's obvious that Reece is no longer taking orders from the Dark Kaizer. Just when the evil man is about to give her one of his energy blasts, Raven appears in the Genobreaker. They exchange angry words, and Prozen sends 3 Genosaurs to attack. Reece watches tearfully while Raven battles with them. Suddenly, stray gunfire hits the building holding Zoid Eve causing it to activate. The Death Stinger begins to glow. Meanwhile, Lt. O'Connell is flying overhead sending arial photos back to the Ultrasaurus. Captaim Herman notices that the Death Stinger is resurrected. Also in the skies is Prince Rudolph and a group of whale kings. Rudolph sees a picture of the dark Kaizer and immediatly recognizes him as Prozen. On the ground, Van watches helplessly as the Death Sting

In the Final Episode, Van and Raven give it all they got to defeat the reserected Death Saurer. Hiltz is on a rampage blasting away with the the Sauer's Charged Particle Beam. To destroy the Death Saurer, Fiona and Zeke were prepared to sacrifice themselves to destroy Zoid Eve. Doing so, all of the Zoids on Zi would be destroyed. Van stopped them, exclaiming that he could destroy it, by launching himself from the Gravity Cannon on the Ultrasaurus! The energy shield was destroyed by Raven, with the Genobreakers charged particle beam. The Liger was shot out of the cannon and thrusted through a charged particle blast right through the zoid core of the Death Saurer, destroying it and Hiltz. The Zoid Eve went back underground, and the Death Saurer exploded, thus ending the series with Fiona, Van, and the Blade Liger. Peace is once again restored to the planet Zi.